Type Package
Title Optimal Stratification of Univariate Populations
Version 1.0-3
Date 2021-11-23
Author Karuna G. Reddy, M.G.M. Khan
Maintainer Karuna G. Reddy <karuna.reddy@usp.ac.fj>
Description This implements the stratification of univariate populations under stratified sampling designs using the method of Khan et al. (2002) https://doi.org/10.1177/0008068320020518, Khan et al. (2008) https://www150.statcan.gc.ca/n1/pub/12-001-x/2008002/article/10761-eng.pdf and Khan et al. (2015) https://doi.org/10.1080/02664763.2015.1018674. It determines the Optimum Strata Boundaries (OSB) and Optimum Sample Sizes (OSS) for the study variable, \(y\), using the best-fit frequency distribution of a survey variable (if data is available) or a hypothetical distribution (if data is not available). The method formulates the problem of determining the OSB as mathematical programming problem which is solved by using a dynamic programming technique. If a dataset of the population is available to the surveyor, the method estimates its best-fit distribution and determines the OSB and OSS under Neyman allocation directly. When the dataset is not available, stratification is made based on the assumption that the values of the study variable, \(y\), are available as hypothetical realizations of proxy values of \(y\) from recent surveys. Thus, it requires certain distributional assumptions about the study variable. At present, it handles stratification for the populations where the study variable follows a continuous distribution, namely, Pareto, Triangular, Right-triangular, Weibull, Gamma, Exponential, Uniform, Normal, Log-normal and Cauchy distributions. In this vignette, the two major functionalities in the package are applied to a number of real and simulated populations and to some hypothetical populations.
License GPL (>= 2)
LazyData yes
NeedsCompilation yes
Depends R (>= 3.4.4), MASS, fitdistrplus, actuar, triangle, mc2d, zipfR
NeedsCompilation yes
Repository CRAN
Date/Publication 2021-11-23 10:00:00
The main aim of stratification is to produce estimators with a small variance when a population characteristic \((y)\) is under study. A simple method that can be used to create strata for this population, if \(y\) itself is the stratification variable. The ideal situation is that the distribution of such a study variable is known and the OSB can be determined by placing boundaries on the range of this distribution at suitable cut-points. This problem of determining the OSB, when both the estimation and stratification variables are the same, was first discussed by Dalenius (1950). He provided equations for the determination of stratum boundaries that minimize the variance of population estimates under optimal allocation. Dalenius (1957) futher proposed a solution to the problem by taking equal intervals of the cumulative square root of frequency scale of the stratification variable.
One of the many kinds of stratification methods that has been proposed in the literature is due to Bühler and Deutler (1975). They formulated the problem of determining OSB as an optimization problem and developed a computational technique to solve the problem by using Dynamic Programming (DP). A good review of this method can be found in M. G. M. Khan, Nand, and Ahmad (2008). The procedure is also applied by E. A. Khan, Khan, and Ahsan (2002), M. G. M. Khan, Khan, and Ahsan (2003), M. G. M. Khan, Sehar, and Ahsan (2005), M. G. M. Khan, Nand, and Ahmad (2008), M. G. M. Khan, Ahmad, and Khan (2009), M. G. M. Khan et al. (2015), M. G. M. Khan, Reddy, and Rao (2015) for determining OSB for many different distributions. With the known frequency function of the study variable, they considered the problem of finding OSB as an equivalent problem of determining Optimum Strata Width (OSW), which is formulated as a Mathematical Programming Problem (MPP) and solved by using DP technique. They applied the technique to several univariate populations where the study variables followed different probability distributions. In this package, a univariate stratification technique is developed, which is based on the probability distribution assumed by the stratification variable as discussed by the authors above.
As implemented in this package, there are many advantages of using the method. The real advantage of the stratifyR package is that when the dataset of the study variable is not available, which may occur in practice, the package is still able to construct OSB and OSS based on the distributional assumption on the data. Moreover, the population survey can be a costly and time-consuming affair, hence, this approach also has the advantage of determining OSB for the study variable that is not available prior to conducting the survey. This, of course, requires certain distributional or parametric assumptions on the study variables, which can easily be obtained from recent or past surveys.
Other advantages of the method are that it leads to substantial gains in the precision of the estimates over other available methods. Results reveal that the variances get smaller with increasing number of strata \((L)\), and they get much smaller at a much faster rate than other available methods. Once the OSB have been determined, the Optimum Sample Sizes (OSS) can be easily calculated for each stratum using Neyman allocation (Neyman (1934)). The algorithm may be a little slow, however, it does provide very efficient results which is probably the most important objective of our survey estimation efforts.
The stratifyR package implements the DP technique (from various literature by Khan et al) as a stratification procedure for univariate populations, when the stratification variable follows a continuous probability distribution, namely: uniform, triangular, right-triangular, pareto, exponential, normal, log-normal, cauchy, weibull and gamma. The package is able to determine the OSB and OSS from real data and as well as hypothetical situations when the dataset is not available. The latter requires some assumptions about the distribution and its initial value, range, parameter values, fixed sample size, etc.
There are two major functions which basically solve the two types of stratification problems: strata.data() which carries out univariate stratification for those univariate populations where dataset is available and strata.distr() which performs stratification when dataset is not available prior to conducting the survey.
In the former case, data on the study variable, number of strata \((h)\), fixed sample size \((n)\) and population size \((N)\) are used as the input arguments to the strata.data() function in the package. In the latter case, strata.distr() function is called which requires the distribution to be assumed, its parameters, the inital value and the estimated range of the distribution, fixed sample \((n)\) and population sizes \((N)\). When executed, both the functions output the OSB and OSS, amongst other quantities such as stratum weight \((W_{h})\), stratum variance \((S_{h}^{2})\), stratum objective function values \((W_{h}S_{h})\), stratum sample sizes \((n_{h})\), stratum population sizes \((N_{h})\) and stratum sampling fraction \((f_{h})\).
The following sections show the general formulation of the problem of stratification, the DP solution procedure, the concept of Neyman allocation as the method of determining sample size and the overview of package functionalities. The package is then applied to numerous survey populations with real and simulated data to illustrate its application.
Let the target population of the variable under study be stratified into \(L\) strata where the estimation of the mean of the study variable \((y)\) is of interest. If a simple random sample of size \(n_{h}\) is to be drawn from \(h^{th}\) stratum with sample mean \(\bar{y}_{h}\), then the stratified sample mean, \(\bar{y}_{st}\), is given by \[\begin{eqnarray} \bar{y}_{st}=\sum_{h=1}^{L}W_{h}\bar{y}_{h}, \tag{1} \end{eqnarray}\] where \(W_{h}\) (stratum weight) is the proportion of the population contained in the \(h^{th}\) stratum.
When the finite population correction factors are ignored, under the Neyman (1934) allocation, the variance of \(\bar{y}_{st}\) is given by \[\begin{eqnarray} Var(\bar{y}_{st})=\dfrac{\left(\sum_{h=1}^{L}W_{h}S_{h}\right)^{2}}{n}, \tag{2} \end{eqnarray}\] where \(S_{h}^{2}\) is the stratum variance for the study variable in the \(h^{th}\) (where \(h=1, 2, ..., L\)) stratum and \(n\) is the preassigned total sample size.
Let \(f(y);\;a\leq y\leq b\) be the frequency function of the study variable, \(y\), on which OSB are to be constructed. If the population mean of this study variable is estimated under Neyman allocation, then the problem of determining OSB is to cut up the range, \(d=b-a\), at \((L-1)\) intermediate points \(a=y_{0} \leq y_{1} \leq y_{2} \leq, ..., \leq y_{L-1} \leq y_{L}=b\,\) such that (2) is minimum. The lower and upper bounds of the study variable are denoted by \(a\) and \(b\) respectively and the cut-points \(y_{0}, y_{1}, y_{2}, ..., y_{L-1}\) are the OSB.
For a fixed sample size \(n\), minimizing the expression of the right hand side of equation (2) is equivalent to minimizing \[\begin{eqnarray} \sum_{h=1}^{L} W_{h}S_{h} \tag{3} \end{eqnarray}\]
If \(f(y)\) is known and integrable, the stratum weight \((W_{h})\), stratum variance \((S_{h}^{2})\) and stratum mean \((\mu_{h})\) can be obtained as a function of the boundary points \(y_{h}\) and \(y_{h-1}\) by using the following expressions: \[\begin{eqnarray}\label{stratumweight} W_{h} = \int_{y_{h-1}}^{y_{h}} f(y)dy \tag{4} \end{eqnarray}\]
\[\begin{eqnarray} S_{h}^{2}= \dfrac{1}{W_{h}}\int_{y_{h-1}}^{y_{h}}y^{2}f(y)dy - \mu_{h}^{2} \tag{5} \end{eqnarray}\]
\[\begin{eqnarray} \textrm{where}\;\;\;\mu_{h}=\dfrac{1}{W_{h}}\int_{y_{h-1}}^{y_{h}}yf(y)dy \tag{6} \end{eqnarray}\]
where \((y_{h-1}, y_{h})\) are the boundaries of \(h^{th}\) stratum.
Thus, the objective function in (3) could be expressed as a function of boundary points \(y_{h}\) and \(y_{h-1}\) only. We further define \[\begin{eqnarray} l_{h}=y_{h}-y_{h-1}; \; h=1,2, ..., L \tag{7} \end{eqnarray}\]
where \(l_{h}\geq 0\) denotes the range or width of the \(h^{th}\) stratum. Then, the range of the distribution, \(d = b - a\), is expressed as a function of stratum width as: \[\begin{eqnarray}\label{215} \sum_{h=1}^{L}l_{h}=\sum_{h=1}^{L}(y_{h}-y_{h-1}) = b-a = y_{L} - y_{0} = d \tag{8} \end{eqnarray}\] The \(h^{th}\) stratification point \(y_{h};\;h=1,2,..., L\,\) is then expressed as \(y_{h}=y_{h-1}+l_{h}\) and from (8), the problem can be treated as an equivalent problem of determining Optimum Strata Widths (OSW), \(l_{1}, l_{2}, ..., l_{L}\). Due to the special nature of functions, the problem may be treated as a function of \(l_{h}\) alone and can be expressed as: \[\begin{eqnarray}\label{genMPP} &\textrm{Minimize}& \;\;\; \sum_{h=1}^{L}\phi_{h}(l_{h}),\nonumber \\ &\textrm{subject to}&\;\;\;\; \sum_{h=1}^{L}l_{h} = d,\nonumber \\ &\textrm{and}& \;\;\;\; l_{h} \geq 0; \;\; h = 1,2,...,L. \tag{9} \end{eqnarray}\]
Many multistage decision problems can be formulated as a Mathematical Programming Problem (MPP). The Dynamic Programming technique, developed by Bellman, R E (1957), is a computational method which is well suited for solving MPPs that may be treated as a multistage decision problem. The DP technique determines the optimum solution of a multistage problem by decomposing it into stages, each stage comprising of a single stage. The advantage of the decomposition is that the optimization process at each stage involves one variable only, which simplifies the computational task by dealing with all variables simultaneously.
The solution to an MPP is achieved in a sequential manner starting from one stage problem, moving onto a two stage problem, to a three stage problem and so on until finally all stages are included. The solution for \(n\) stages is obtained by adding the \(n^{th}\) stage to the solution of \(n - 1\) stages.
The basic concept of DP technique is contained in the principle of optimality proclaimed by Bellman, R E (1957), which implies that given the initial state of a system, an optimal policy for the subsequent stages does not depend upon the policy adopted at the preceding stages. It determines the optimum solution of a multi-variable problem by decomposing it into stages, each stage compromising a single variable sub-problem. A dynamic programming model is basically a recursive equation which links the different stages of the problem in a manner which guarantees that each stage’s optimal feasible solution is also optimum and feasible for the entire problem.
Consider the following sub-problem of (9) for first \(k(<L)\) strata:
\[\begin{eqnarray} &\text{Minimize}& \;\;\;\; \sum_{h=1}^{k}\phi_{h}(l_{h}),\nonumber \\ &\text{subject to}&\;\;\;\;\; \sum_{h=1}^{k}l_{h} = d_{k},\nonumber \\ &\text{and}& \;\;\;\;\; l_{h} \geq 0; \;\; h = 1,2,...,k.\tag{10} \end{eqnarray}\]
where \(d_{k}< d\) is the total width available for division into strata or the state value at stage \(k\). Note that \(d_{k} = d\) for \(k = L\).
The transformation functions are given by:
\[\begin{eqnarray*} d_{k}\;\;&=&\;\;l_{1}+l_{2}+...+l_{k},\\ d_{k-1}\;\;&=&\;\;l_{1}+l_{2}+...+l_{k-1}\;=\;d_{k}-l_{k},\\ d_{k-2}\;\;&=&\;\;l_{1}+l_{2}+...+l_{k-2}\;=\;d_{k-1}-l_{k-1},\\ &\vdots&\;\;\;\;\;\;\;\;\;\;\;\;\vdots\\ d_{2}\;\;&=&\;\;l_{1}+l_{2}\;=\;d_{3}-l_{3},\\ d_{1}\;\;&=&\;\;l_{1}\;=\;d_{2}-l_{2}. \end{eqnarray*}\]
Let \(\Phi_{k}(d_{k})\) denote the minimum value of the objective function of MPP (10), that is,
\[\begin{equation} \Phi_{k}(d_{k}) = \text{min}\left[ \sum_{h=1}^{k}\phi_{h}(l_{h})\bigg|\sum_{h=1}^{k}l_{h}=d_{k}, \,\textrm{and}\,l_{h}\;\geq 0;\,h=1,2,...,k \;\textrm{and}\; 1\leq k \leq L \right].\nonumber \end{equation}\]
With the above definition of \(\Phi_{k}(d_{k})\), (10) is equivalent to finding \(\Phi_{L}(d)\) recursively by finding \(\Phi_{k}(d_{k})\) for \(k = 1, 2, ..., L\) and \(0 \leq d_{k} \leq d.\)
We can write:
\[\begin{equation} \Phi_{k}(d_{k}) = \text{min}\left[\phi_{k}(l_{k})+ \sum_{h=1}^{k-1}\phi_{h}(l_{h})\bigg|\sum_{h=1}^{k-1}l_{h}=d_{k}-l_{k}, \;\textrm{and}\;l_{h}\;\geq\;0;\;h=1,2,...,k\right].\nonumber \end{equation}\]
For a fixed value of \(l_{k}\); \(0 \leq l_{k} \leq d_{k}\),
\[\begin{equation} \Phi_{k}(d_{k}) = \phi_{k}(l_{k})+ \text{min}\left[ \sum_{h=1}^{k-1}\phi_{h}(l_{h})\bigg|\sum_{h=1}^{k-1}l_{h}=d_{k}-l_{k}, \;\textrm{and}\;l_{h}\;\geq 0;\;h=1,2,...k-1\;\textrm{and}\;\; 1\leq k \leq L\right].\nonumber \end{equation}\]
Using the Bellman’s principle of optimality, a forward recursive equation can be written as:
\[\begin{equation} \Phi_{k}(d_{k}) = {\text{min} \atop 0 \leq l_{k} \leq d_{k}}\left[\phi_{k}(l_{k}) + \Phi_{k-1}(d_{k}-l_{k})\right],\;\;k\;\geq\;2.\tag{11} \end{equation}\]
For the first stage, that is, for \(k=1\):
\[\begin{equation} \Phi_{1}(d_{1}) = \phi_{1}(d_{1})\; \Longrightarrow\;\;l_{1}^{*}=d_{1},\tag{12} \end{equation}\]
where \(l_{1}^{*}=d_{1}\) is the optimum width of the first stratum. The relations (11) and (12) are solved recursively for each \(k=1, 2, ..., L\,\) and \(0 \leq d_{k} \leq d\), and \(\Phi_{L}(d)\) is obtained. From \(\Phi_{L}(d)\) the optimum width of \(L^{th}\) stratum, \(l_{L}^{*}\), is obtained. From \(\Phi_{L-1}(d - l_{L}^{*})\) the optimum width of \((L - 1)^{th}\) stratum, \(l_{L-1}^{*}\), is obtained and so on until \(l_{1}^{*}\) is obtained.
The above algorithm of the Dynamic Programming solution procedure to solve the MPP given in (9) is summarized with the following steps:
When OSB \((y_{h}, y_{h-1})\) have been determined, the Optimum Sample Sizes (OSS) \(n_{h}; h=1,2,...,L\,\) that minimizes the variance of the estimate can easily be computed. The sample size \(n_{h}\) are obtained for a fixed total sample of size \(n\) under the Neyman allocation for \(h=1,2,...,L\,\) and given as follows:
\[\begin{equation}\label{Ney_alloc} n_{h} = n\,\frac{W_{h}S_{h}}{\sum_{h=1}^{L}W_{h}S_{h}} \tag{13} \end{equation}\]
where \(W_{h}\) and \(S_{h}\) are derived in terms of the optimum boundary points \((y_{h}, y_{h-1})\).
In Neyman allocation, the total sample size is proportional to the stratum size multiplied by the standard deviation of the stratum. If the variances are specified correctly, Neyman allocation will give an estimator with smaller variance compared to proportional allocation (Lohr (2009)).
In equation (13), it is also worth noting that the OSB \((y_{h}, y_{h-1})\) are so obtained that \(n_{h}\) must satisfy the restrictions:
\[\begin{equation}\label{res} 1\leq n_{h}\leq N_{h}, \tag{14} \end{equation}\]
where \(N_{h}=NW_{h}\). Thus, the restriction (14) indicates that the \(h^ {th}\) stratum must form with at least one unit and also avoid the problem of over-sampling.
For the numerical illustrations and application of the package, some of the real datasets such as ‘sugarcane’ of M. G. M. Khan, Reddy, and Rao (2015), ‘anaemia’ of K. G. Reddy, Khan, and Rao (2014); ‘hies’ and ‘math’ data are provided in the stratifyR. The ‘quakes’ and ‘Boston’ data provided in the datasets package in R are also used for illustration purposes. The stratifyR package is also tested on some published and commonly-used datasets such as ‘UScities’ and ‘UScolleges’ data from Cochran (1961), ‘Debtors’ data of Gunning and Horgan (2004), ‘REV84’ variable for ‘Swedish municipalities’ data from Särdnal, Swensson, and Wretman (1992) and ‘MRTS’ variable from ‘Statistics Canada Monthly Retail Trade Survey’ together with ‘SHS’ data collected in ‘Statistics Canada Survey of Household Spending.’ For those distributions where real data is not found in literature, data is simulated to demonstrate the application of the package in this documentaion.
For a user, there are two different routes available in the package and these are basically dependent on the type of stratification problem to be solved. It could either be a data-based (i.e., when the dataset of the stratification variable is available) or a distribution-based (i.e., when dataset is not available) stratification problem. Whether stratification is based on data or not, the idea is that the problem is formulated as an MPP using the estimated (with available data) or assumed (with unavailable data) distribution of the data set. There are numerous functions created in the package, however, there are only a few major functions that are used by the two different types of problems being studied in univariate stratification.
If it is a data-based problem, the function used is strata.data() and the user has to provide as input arguments: the data, the number of strata (\(L\)) and the fixed sample size (\(n\)). For the distribution-based problem, the function used is strata.distr() and the user has to provide the name of the assumed distribution, number of strata (\(L\)), possible range of data (distance), fixed sample size (\(n\)) and the population size (\(N\)). The following two subsections delve a little deeper into the workings surrounding the two functions: strata.data() and strata.distr().
This function computes the OSB, OSS, and other important quantities from univariate survey populations by employing the methodology proposed by E. A. Khan, Khan, and Ahsan (2002) M. G. M. Khan, Khan, and Ahsan (2003), M. G. M. Khan, Sehar, and Ahsan (2005), M. G. M. Khan, Nand, and Ahmad (2008), M. G. M. Khan, Ahmad, and Khan (2009), Nand and Khan (2009), M. G. M. Khan et al. (2015), M. G. M. Khan, Reddy, and Rao (2015), Karuna Garan Reddy, Khan, and Khan (2018) and Karuna G. Reddy and Khan (2019). Their method uses the estimated distribution of the data and formulates the problem of determining OSB as a Mathematical Programming Problem which is an optimization problem that is solved by the DP technque. The OSB obtained are optimal solutions that are used to calculate the OSS under Neyman allocation. The usage and arguments are as follows:
strata.data(data, h, n, cost=FALSE, ch=NULL)
data - A vector: data containing every unit of the survey population
h - A numeric: number of strata to be sampled. The default is 2
n - A numeric: fixed total sample size
cost - A logical: stratum cost. Default cost=FALSE.
ch - A numeric: denotes a vector of stratum costs. Default ch=NULL.
To show the application of the strata.data() function, an example of the command used and its output from the package is given below. The problem uses the ‘mag’ variable from the ‘quakes’ data (with a population of \(N=1000\)) available from the datasets package in R. To construct a 2-strata solution with a fixed sample size of \(n=300\), we use the following codes:
data(quakes)
head(quakes)
#> lat long depth mag stations
#> 1 -20.42 181.62 562 4.8 41
#> 2 -20.62 181.03 650 4.2 15
#> 3 -26.00 184.10 42 5.4 43
#> 4 -17.97 181.66 626 4.1 19
#> 5 -20.42 181.96 649 4.0 11
#> 6 -19.68 184.31 195 4.0 12
mag <- quakes$mag
length(mag)
#> [1] 1000
hist(mag) #to see the distribution
library(stratifyR)
#> Loading required package: fitdistrplus
#> Loading required package: MASS
#> Loading required package: survival
#> Loading required package: zipfR
#> Loading required package: actuar
#>
#> Attaching package: 'actuar'
#> The following objects are masked from 'package:stats':
#>
#> sd, var
#> The following object is masked from 'package:grDevices':
#>
#> cm
#> Loading required package: triangle
#> Loading required package: mc2d
#> Loading required package: mvtnorm
#>
#> Attaching package: 'mc2d'
#> The following objects are masked from 'package:base':
#>
#> pmax, pmin
res <- strata.data(mag, h = 2, n=300) # a 2-strata solution
#> The program is running, it'll take some time!
summary(res)
#> _____________________________________________
#> Optimum Strata Boundaries for h = 2
#> Data Range: [4, 6.4] with d = 2.4
#> Best-fit Frequency Distribution: lnorm
#> Parameter estimate(s):
#> meanlog sdlog
#> 1.52681032 0.08503554
#> ____________________________________________________
#> Strata OSB Wh Vh WhSh nh Nh fh
#> 1 4.68 0.58 0.03 0.109 140 585 0.24
#> 2 6.4 0.42 0.09 0.124 160 415 0.38
#> Total 1.00 0.12 0.233 300 1000 0.30
#> ____________________________________________________
All calculations have been rounded off to 2 decimal places, hence, the individual stratum solutions provided in the tables may not always add up to the totals.
This function is also used to compute the OSB, OSS, and other important quantities from univariate survey populations by employing the methodology proposed by Khan et al given earlier. Its algorithm is quite similar to that of the strata.data(), however, its functionality is applied to the case where the dataset of the population is not available and the distributonal assumptions of the study variable are strictly required. Another caveat for such distribution-based stratification is that the distr.alloc() function uses the probability density functions of the assumed distributions and integration rules presented by equations (4)-(6) to calculate the stratum sample sizes. It must be noted that this function works on ideal distributions that assumes the parameters chosen by the user. The usage and arguments are as follows:
strata.distr(h, initval = NULL, dist = NULL,
distr = c("pareto", "triangle", "rtriangle", "weibull", "gamma",
"exp", "unif","norm", "lnorm", "cauchy"), params = c(shape=0,
scale=0, rate=0, gamma=0, location=0, mean=0, sd=0, meanlog=0,
sdlog=0, min=0, max=0, mode=0), n, N, cost=FALSE, ch=NULL)
h - A numeric: number of strata to be sampled
initval - A numeric: initial value of the assumed distribution
dist - A numeric: distance or range of the assumed distribution
distr - A character: the assumed distribution of the hypothetical population
params - A list: parameters of the assumed distribution
n - A numeric: fixed total sample size
N - A numeric: fixed population size
cost - A logical: stratum cost. Default cost=FALSE.
ch - A numeric: denotes a vector of stratum costs. Default ch=NULL.
The algorithm for strata.distr() is quite similar to the strata.data() for the contruction of OSB. It is only at the sample allocation (OSS) stage that the two are different. strata.distr() is the main function and once the OSB have been computed, this function uses the distr.alloc() function which uses the numerical integration rules for different distibutions (i.e., the equations (4)-(6)) to compute the OSS.
To show the application of the strata.distr() function, let us construct a 2-strata solution assuming that the dataset of the stratification variable is not available but its distribution and estimated parameters are. Let us consider the ‘depth’ variable from the ‘quakes’ dataset from the datasets package, which has a Triangular distribution with parameters \(min=39.99998, max=680, mode=39.99999\). It starts at an initial value of \(40\) and has a distance (range) of \(640\) with a fixed sample size of \(n=300\) from a population of \(N=1000\) seismic events. Thus, we use the following commands:
data(quakes)
depth <- quakes$depth
hist(depth) #see distribution
min(depth); max(depth); d=max(depth)-min(depth);d #min, max and range of data
#> [1] 40
#> [1] 680
#> [1] 640
# the 2-strata solution is
res <- strata.distr(h=2, initval=40, dist=640, distr = "triangle",
params = c(min=39.99998, max=680, mode=39.99999), n=300, N=1000)
#> The program is running, it'll take some time!
summary(res)
#> _____________________________________________
#> Optimum Strata Boundaries for h = 2
#> Data Range: [40, 680] with d = 640
#> Best-fit Frequency Distribution: triangle
#> Parameter estimate(s):
#> min max mode
#> 39.99998 680.00000 39.99999
#> ____________________________________________________
#> Strata OSB Wh Vh WhSh nh Nh fh
#> 1 266.72 0.58 4217.46 37.862 145 583 0.25
#> 2 680 0.42 9488.76 40.619 155 417 0.37
#> Total 1.00 13706.22 78.481 300 1000 0.30
#> ____________________________________________________
As discussed earlier, the stratifyR package is able to handle ten continuous distributions that are quite commonly-used in real-life situations. This section presents a brief overview of these distributions and the application of the proposed method of stratification using real or simulated data which follows a particular distribution. Examples for hypothetical distributions are also presented. For the sake of brevity, the mathematical formulations of the problem of determining the OSB and the DP solution procedure are presented only for the Pareto Type II variable. For all other distributions, only the examples are presented to illustrate the application of the package.
Let the study variable follow the Pareto Type II distribution on the domain of [\(0, +\infty\)], its two-parameter probability density function with a state space \(y\geq 0\) is given by: \[\begin{equation} f(y; s,a)=\dfrac{a\,s^{a}}{(y+s)^{a+1}}, \;\;\;\;\;a,s > 0 \tag{15} \end{equation}\]
where \(\alpha > 0\) is the shape parameter and \(s>0\) is the scale parameter of the distribution.
If the study variable \(y\) follows Pareto II (or Lomax) distribution (i.e., \(y\sim P(a, s)\)) with density function given by (15). By using equations (4)-(6), the formulated MPP given in (10) could be expressed as: \[\begin{eqnarray} \textrm{Minimize} \;\;\; \sum_{h=1}^{L} \textit{SQRT} && \Biggl\{as^{2a} \left[\dfrac{(y_{h-1}+l_{h}+s)^{a}-(y_{h-1}+s)^{a}}{(y_{h-1}+s)^{a}(y_{h-1}+l_{h}+s)^{a}}\right] \nonumber \\[10pt] && \times\left[\dfrac{(y_{h-1}+l_{h}+s)^{2-a}}{2-a} - \dfrac{2s(y_{h-1}+l_{h}+s)^{1-a}}{1-a} \right. \nonumber\\[10pt] && - \dfrac{s^2(y_{h-1}+l_{h}+s)^{-a}}{a} -\dfrac{(y_{h-1}+s)^{2-a}}{2-a}\nonumber\\[10pt] && + \left. \dfrac{2s(y_{h-1}+s)^{1-a}}{1-a} + \dfrac{s^2(y_{h-1}+s)^{-a}}{a}\right] \nonumber\\[10pt] && \times \dfrac{s^{2a}}{(1-a)^{2}}\left[\dfrac{a(y_{h-1}+l_{h})+s}{(y_{h-1}+l_{h}+s)^{a}} - \dfrac{ay_{h-1}+s}{(y_{h-1}+s)^{a}} \right]^{2}\Biggr\}\nonumber\\[15pt] \textrm{subject to} && \;\;\;\; \sum_{h=1}^{L}l_{h} = d,\nonumber \\ \textrm{and} && \;\;\;\; l_{h} \geq 0; \;\; h = 1,2,...,L. \tag{16} \end{eqnarray}\]
where \(d=y_{L}-y_{0}\), \(a\) and \(s\) are parameters of the Pareto Type II distribution.
To solve the MPP (16) using the DP technique as a solution procedure, we apply the algorithm, that is, the solution proceure using Dynamic Progrmming technique discussed earlier in Section 4. After substituting the quatity \(y_{h-1}=y_{0} + d_{h} - l_{h}\), the recurrence relations (11) and (12) are reduced to:
For the first stage, \(k=1\), at \(l_{1}^{*}=d_{1}\):
\[\begin{eqnarray} \Phi_{1}d_{1}&=& \textrm{Sqrt}\Biggl\{ as^{2a}\left[\dfrac{(d_{1}+y_{0}+s)^{a}-(y_{0}+s)^{a}}{(y_{0}+s)^{a}(d_{1}+y_{0}+s)^{a}}\right] \nonumber\\[10pt] &&\times\left[\dfrac{(d_{1}+y_{0}+s)^{2-a}}{2-a} - \dfrac{2s(d_{1}+y_{0}+s)^{1-a}}{1-a} \right. \nonumber\\[10pt] &&- \dfrac{s^2(d_{1}+y_{0}+s)^{-a}}{a} -\dfrac{(y_{0}+s)^{2-a}}{2-a}\nonumber\\[10pt] &&+\left. \dfrac{2s(y_{0}+s)^{1-a}}{1-a} + \dfrac{s^2(y_{0}+s)^{-a}}{a}\right] \nonumber\\[10pt] &&\times \dfrac{s^{2a}}{(1-a)^{2}}\left[\dfrac{a(d_{1}+y_{0})+s}{(d_{1}+y_{0}+s)^{a}} - \dfrac{ay_{0}+s}{(y_{0}+s)^{a}} \right]^{2}\Biggr\} \tag{17} \end{eqnarray}\]
And for the stages \(k\geq2\):
\[\begin{eqnarray} \Phi_{k}d_{k}&=&\min_{0\leq l_{k}\leq d_{k}}\Biggl\{ \textrm{Sqrt}\Biggl\{ as^{2a}\left[\dfrac{(d_{k}+y_{0}+s)^{a}-(d_{k}+l_{k}+y_{0}+s)^{a}}{(d_{k}+l_{k}+y_{0}+s)^{a}(d_{k}+y_{0}+s)^{a}}\right] \nonumber\\[10pt] &&\times\left[\dfrac{(d_{k}+y_{0}+s)^{2-a}}{2-a} - \dfrac{2s(d_{k}+y_{0}+s)^{1-a}}{1-a} \right. \nonumber\\[10pt] &&- \dfrac{s^2(d_{k}+y_{0}+s)^{-a}}{a} -\dfrac{(d_{k}+l_{k}+y_{0}+s)^{2-a}}{2-a}\nonumber\\[10pt] &&+\left. \dfrac{2s(d_{k}+l_{k}+y_{0}+s)^{1-a}}{1-a} + \dfrac{s^2(d_{k}+l_{k}+y_{0}+s)^{-a}}{a}\right] \nonumber\\[10pt] &&\times \dfrac{s^{2a}}{(1-a)^{2}}\left[\dfrac{a(d_{k}+y_{0})+s}{(d_{k}+y_{0}+s)^{a}}- \dfrac{a(d_{k}+l_{k}+y_{0})+s}{(d_{k}+l_{k}+y_{0}+s)^{a}} \right]^{2} \Biggr\} + \Phi_{k-1}(d_{k}-l_{k})\Biggr\}. \tag{18} \end{eqnarray}\]
The recurrence relations (17) and (18) are solved using the DP technique to determine the OSB.
A dataset for a univariate population of size \(N=5000\) with the study variable that follows Pareto Type II distribution (\(pareto\_data\)) was simulated using parameters \(shape=5\) and \(scale=8\) to demonstrate the application of the strata.data() function to determine the OSB and other quantites. The data exhibits a 2-parameter Pareto Type II distribution with the MLE estimates of the parameters as \(shape=5.026907\) and \(scale=8.191676\). The minimum and maximum values in the simulated data are \([y_{0}, y_{L}] = [0.0002193, 38.56871]\), which implies that \(d=38.56849\).
To construct the OSB (a 2-strata solution, i.e., \(h = 2\)) for the \(pareto\_data\) with a fixed total sample size of \(500\), we use the following codes:
set.seed(8235411)
pareto_data <- rpareto(5000, shape=5, scale=8)
head(pareto_data)
#> [1] 1.8464786 0.9226109 1.1079785 9.7699864 4.5600912 0.0441124
hist(pareto_data, breaks=100)
min(pareto_data); max(pareto_data); d=max(pareto_data)-min(pareto_data);d
#> [1] 0.0002192696
#> [1] 38.56871
#> [1] 38.56849
fit <- fitdist(pareto_data, "pareto", start = list(shape = 1, scale = 500))
fit
#> Fitting of the distribution ' pareto ' by maximum likelihood
#> Parameters:
#> estimate Std. Error
#> shape 5.026907 0.4337688
#> scale 8.191676 0.8358576
res <- strata.data(pareto_data, h = 2, n=500) # a 2-strata solution
#> The program is running, it'll take some time!
summary(res)
#> _____________________________________________
#> Optimum Strata Boundaries for h = 2
#> Data Range: [0.0002192696, 38.56871] with d = 38.56849
#> Best-fit Frequency Distribution: pareto
#> Parameter estimate(s):
#> shape scale
#> 5.016949 8.174580
#> ____________________________________________________
#> Strata OSB Wh Vh WhSh nh Nh fh
#> 1 3.03 0.79 0.64 0.632 232 3938 0.06
#> 2 38.57 0.21 11.87 0.732 268 1062 0.25
#> Total 1.00 12.51 1.363 500 5000 0.10
#> ____________________________________________________
Similarly, in order to find the OSB and other quantities, we can apply the strata.distr() function to a Pareto Type II population. Let us assume from past knowledge that the study variable in the population follows Pareto Type II distribution with the given attributes such as the \(shape=5.05, scale=8.20, initial\,value=0.15\) and \(distance=38.55\). Then, if a sample of size \(n=500\) is drawn from the population of size \(N=5000\), we can execute the following command to obtain the results:
res <- strata.distr(h=2, initval=0.15, dist=38.55, distr = "pareto",
params = c(shape=5.05, scale=8.20), n=500, N=5000)
#> The program is running, it'll take some time!
summary(res)
#> _____________________________________________
#> Optimum Strata Boundaries for h = 2
#> Data Range: [0.15, 38.7] with d = 38.55
#> Best-fit Frequency Distribution: pareto
#> Parameter estimate(s):
#> shape scale
#> 5.05 8.20
#> ____________________________________________________
#> Strata OSB Wh Vh WhSh nh Nh fh
#> 1 3.21 0.81 0.67 0.592 241 4057 0.06
#> 2 38.7 0.19 11.42 0.637 259 943 0.27
#> Total 1.00 12.09 1.229 500 5000 0.10
#> ____________________________________________________
Let the study variable follow Triangular distribution on the domain of [\(a, b\)], its three-parameter probability density function with a state space \(y\geq 0\) is given by: \[\begin{equation} f(y) = \begin{cases} \dfrac{2(y-a)}{(b-a)(c-a)}; & y \in [a, c]\\[10pt] \dfrac{2(b-y)}{(b-a)(b-c)}; & y \in (c,b] \\ \end{cases} \tag{19} \end{equation}\]
where \(a\) is the location parameter, \(b\) is the scale parameter and \(c\) is the shape parameter of the distribution.
Then, formulating the problem as an MPP and solving the recurrence relations as discussed above for Pareto II variate, the OSB are obtained.
To solve the MPP formulated for Triangular distribution (19), we apply the algorithm using the DP technique discussed in Section 4. The recurrence relations used to determine the OSB are given by:
For the first stage, \(k=1\), at \(l_{1}^{*}=d_{1}\):
\[\begin{eqnarray} \Phi_{1}d_{1}&=& \textrm{Sqrt}\Biggl\{ \sum_{h=1}^{\lambda_{1}} \dfrac{d_{1}^{2}\sqrt{d_{1}^{2}+6(y_{0}-a)d_{1}+6(y_{0}-a)^{2}}}{3\sqrt{2}(b-a)(c-a)} + \sum_{h=\lambda_{2}}^{L}\dfrac{d_{1}^{2}\sqrt{6(b-y_{0})^{2}-6(b-y_{0})d_{1}+d_{1}^{2}}}{3\sqrt{2}(b-a)(b-c)}\Biggr\} \tag{20} \end{eqnarray}\]
And for the stages \(k\geq2\):
\[\begin{eqnarray} \Phi_{k}d_{k}&=&\min_{0\leq l_{k}\leq d_{k}}\Biggl\{ \textrm{Sqrt}\Biggl\{\sum_{h=1}^{\lambda_{1}} \dfrac{l_{k}^{2}\sqrt{l_{k}^{2}+6a_{k}l_{k}+6a_{k}^{2}}}{3\sqrt{2}(b-a)(c-a)} +\sum_{h=\lambda_{2}}^{L}\dfrac{l_{k}^{2}\sqrt{6b_{k}^{2}-6b_{k}l_{k}+l_{k}^{2}}}{3\sqrt{2}(b-a)(b-c)}\Biggr\} + \Phi_{k-1}(d_{k}-l_{k})\Biggr\} \tag{21} \end{eqnarray}\]
where \(a_{k}=d_{k}-l_{k}+y_{0}-a\) and \(b_{k}=b-d_{k}+l_{k}-y_{0}+a\).
Substituting the values of \(a\), \(b\), \(c\), \(y_{0}\) and \(d\), the OSW (\(l_{h}^{*}\)) and the OSB (\(y_{h}^{*}=y_{h-1}^{*}-l_{h}^{*}\)) are obtained by executing the strata.data() function.
Data on Mathematics marks of first year students in a University in Fiji, with a size of \(N=354\) called ‘math’ data is used to demonstrate the application of the stratifyR package on a Triangular population. In this example, the variable `final_marks’ is used - it exhibits 3-parameter Triangular distribution with the parameters: \(min = 6.205204\), \(max=98.47165\) and \(mode=53.999996\). The minimum and maximum values in the ‘math’ data are \([y_{0}, y_{L}] = [7, 97]\), which implies that \(d=90\).
To construct the OSB (\(h = 2\)) for the `final_marks’ data with a fixed total sample size of \(150\), we use the following code:
data(math)
final_marks <- math$final_marks
hist(final_marks)