simMP: Simulate Somatic Mutations in Cancer Genomes from Mutational Processes

Simulates somatic single base substitutions carried in cancer genomes. By only providing a human reference genome, substitutions that result from mutational processes operative in every cancer genome can be generated.

Version: 0.17.3
Depends: R (≥ 3.0.0), doParallel, utils, foreach, parallel, stats
Imports: Biostrings, BSgenome, GenomeInfoDb, GenomicRanges, IRanges, XVector
Suggests: BSgenome.Hsapiens.UCSC.hg38
Published: 2017-04-21
DOI: 10.32614/CRAN.package.simMP
Author: Nan Zhou
Maintainer: Nan Zhou <zhnanx at>
License: GPL-2
NeedsCompilation: no
CRAN checks: simMP results


Reference manual: simMP.pdf


Package source: simMP_0.17.3.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): simMP_0.17.3.tgz, r-oldrel (arm64): simMP_0.17.3.tgz, r-release (x86_64): simMP_0.17.3.tgz, r-oldrel (x86_64): simMP_0.17.3.tgz


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