deconstructSigs: Identifies Signatures Present in a Tumor Sample

Takes sample information in the form of the fraction of mutations in each of 96 trinucleotide contexts and identifies the weighted combination of published signatures that, when summed, most closely reconstructs the mutational profile.

Version: 1.8.0
Imports: reshape2, BSgenome, BSgenome.Hsapiens.UCSC.hg19, GenomeInfoDb, grDevices, graphics, utils
Suggests: VariantAnnotation
Published: 2016-07-29
Author: Rachel Rosenthal
Maintainer: Rachel Rosenthal <rachel.rosenthal.14 at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Materials: README NEWS
CRAN checks: deconstructSigs results


Reference manual: deconstructSigs.pdf


Package source: deconstructSigs_1.8.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): deconstructSigs_1.8.0.tgz, r-oldrel (arm64): not available, r-release (x86_64): not available
Old sources: deconstructSigs archive

Reverse dependencies:

Reverse imports: musicatk


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