VertexWiseR: Simplified Vertex-Wise Analyses of Whole-Brain and Hippocampal Surface

Provides functions to run statistical analyses on surface-based neuroimaging data, computing measures including cortical thickness and surface area of the whole-brain and of the hippocampi. It can make use of 'FreeSurfer' preprocessed datasets and 'HippUnfold' hippocampal segmentation outputs for a given sample by restructuring the data values into a single file. The single file can then be used by the package for analyses independently from its base dataset and without need for its access.

Version: 1.0.0
Depends: R (≥ 4.0.0)
Imports: doParallel, doSNOW, foreach, freesurferformats, fs, gifti, grDevices, igraph, methods, reticulate, stats, utils
Published: 2024-06-13
DOI: 10.32614/CRAN.package.VertexWiseR
Author: Junhong Yu ORCID iD [aut], Charly Billaud ORCID iD [aut, cre]
Maintainer: Charly Billaud <charly.billaud at>
License: GPL-3
NeedsCompilation: no
SystemRequirements: Miniconda3 (>= 23.10.0); BrainStat (reticulate installation, >=0.4.2)
Materials: README
CRAN checks: VertexWiseR results


Reference manual: VertexWiseR.pdf


Package source: VertexWiseR_1.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): VertexWiseR_1.0.0.tgz, r-oldrel (arm64): VertexWiseR_1.0.0.tgz, r-release (x86_64): VertexWiseR_1.0.0.tgz, r-oldrel (x86_64): VertexWiseR_1.0.0.tgz


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