HextractoR: Integrated Tool for Hairping Extraction of RNA Sequences

Simple and integrated tool that automatically extracts and folds all hairpin sequences from raw genome-wide data. It predicts the secondary structure of several overlapped segments, with longer length than the mean length of sequences of interest for the species under processing, ensuring that no one is lost nor inappropriately cut.

Version: 1.4
Imports: seqinr, parallel, doParallel, foreach
Published: 2019-08-06
DOI: 10.32614/CRAN.package.HextractoR
Author: Cristian Yones
Maintainer: Cristian Yones <cyones at sinc.unl.edu.ar>
License: Apache License 2.0
NeedsCompilation: no
Materials: README
CRAN checks: HextractoR results


Reference manual: HextractoR.pdf


Package source: HextractoR_1.4.tar.gz
Windows binaries: r-devel: HextractoR_1.4.zip, r-release: HextractoR_1.4.zip, r-oldrel: HextractoR_1.4.zip
macOS binaries: r-release (arm64): HextractoR_1.4.tgz, r-oldrel (arm64): HextractoR_1.4.tgz, r-release (x86_64): HextractoR_1.4.tgz, r-oldrel (x86_64): HextractoR_1.4.tgz
Old sources: HextractoR archive


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