CRAN Package Check Results for Package lme4

Last updated on 2015-05-27 09:47:55.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1-7 41.66 314.98 356.64 WARN
r-devel-linux-x86_64-debian-gcc 1.1-7 47.48 305.88 353.36 WARN
r-devel-linux-x86_64-fedora-clang 1.1-7 378.71 WARN
r-devel-linux-x86_64-fedora-gcc 1.1-7 687.62 WARN
r-devel-osx-x86_64-clang 1.1-7 544.40 WARN
r-devel-windows-ix86+x86_64 1.1-7 127.00 742.00 869.00 WARN
r-patched-linux-x86_64 1.1-7 47.16 304.41 351.57 WARN
r-patched-solaris-sparc 1.1-7 4311.10 ERROR
r-patched-solaris-x86 1.1-7 882.00 WARN
r-release-linux-x86_64 1.1-7 44.14 318.76 362.91 WARN
r-release-osx-x86_64-mavericks 1.1-7 NOTE
r-release-osx-x86_64-snowleopard 1.1-7 ERROR
r-release-windows-ix86+x86_64 1.1-7 121.00 745.00 866.00 WARN
r-oldrel-windows-ix86+x86_64 1.1-7 118.00 834.00 952.00 NOTE

Memtest notes: UBSAN-gcc UBSAN-gcc

Check Details

Version: 1.1-7
Check: installed package size
Result: NOTE
     installed size is 23.2Mb
     sub-directories of 1Mb or more:
     doc 1.3Mb
     libs 19.1Mb
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1-7
Check: use of S3 registration
Result: WARN
    Registered S3 methods from standard package(s) overwritten by 'lme4':
     method from
     coef.lmList nlme
     formula.lmList nlme
     update.lmList nlme
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 1.1-7
Check: R code for possible problems
Result: NOTE
    GQdk: no visible binding for global variable ‘GQN’
    vcov.merMod : calc.vcov.hess: no visible global function definition for
     ‘forceSymmetric’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1-7
Check: tests
Result: ERROR
    Running the tests in ‘tests/testOptControl.R’ failed.
    Last 13 lines of output:
     Loading required package: Rcpp
     > dat <- read.csv(system.file("testdata","dat20101314.csv",package="lme4"))
     > NMcopy <- lme4:::Nelder_Mead
     >
     > cc <- capture.output(lmer(y ~ (1|Operator)+(1|Part)+(1|Part:Operator), data=dat,
     + control=
     + lmerControl("NMcopy",
     + optCtrl= list(iprint=20))))
     > ## check that printing goes through step 140 twice and up to 240 once
     > findStep <- function(str,n) sum(grepl(paste0("^\\(NM\\) ",n,": "),cc))
     > stopifnot(findStep(cc,140)==2 && findStep(cc,240)==1)
     Error: findStep(cc, 140) == 2 && findStep(cc, 240) == 1 is not TRUE
     Execution halted
Flavor: r-patched-solaris-sparc

Version: 1.1-7
Check: package dependencies
Result: ERROR
    Packages suggested but not available for checking: ‘knitr’ ‘ggplot2’
    
    VignetteBuilder package required for checking but not installed: ‘knitr’
    
    Files named as vignettes but with no recognized vignette engine:
     ‘inst/doc/lmer.Rnw’
    (Is a VignetteBuilder field missing?)
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64-snowleopard