CRAN Package Check Results for Package BoSSA

Last updated on 2017-06-28 09:47:45.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.1 3.36 79.57 82.93 OK
r-devel-linux-x86_64-debian-gcc 2.1 3.23 77.29 80.52 OK
r-devel-linux-x86_64-fedora-clang 2.1 161.63 OK
r-devel-linux-x86_64-fedora-gcc 2.1 157.43 OK
r-devel-windows-ix86+x86_64 2.1 13.00 127.00 140.00 OK
r-patched-linux-x86_64 2.1 3.27 79.78 83.05 OK
r-patched-solaris-sparc 2.1 892.30 ERROR
r-patched-solaris-x86 2.1 206.80 OK
r-release-linux-x86_64 2.1 3.50 78.95 82.45 OK
r-release-windows-ix86+x86_64 2.1 8.00 144.00 152.00 OK
r-release-osx-x86_64 2.1 WARN
r-oldrel-windows-ix86+x86_64 2.1 12.00 166.00 178.00 OK
r-oldrel-osx-x86_64 2.1 OK

Additional issues

noLD

Check Details

Version: 2.1
Check: examples
Result: ERROR
    Running examples in ‘BoSSA-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: plot.pplace
    > ### Title: Plot a pplace object
    > ### Aliases: plot.pplace
    >
    > ### ** Examples
    >
    >
    > data(pplace)
    >
    > ### number type
    > plot(pplace,type="number",main="number")
    >
    > ### color type without and with legend
    > plot(pplace,type="color",main="color without legend",legend=FALSE)
    Error in if (any(DF[A, ] != DF[B, ])) { :
     missing value where TRUE/FALSE needed
    Calls: plot ... plot.pplace -> plot -> plot.phylo -> phylogram.plot
    Execution halted
Flavor: r-patched-solaris-sparc

Version: 2.1
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘BiocStyle’ ‘phyloseq’
Flavor: r-release-osx-x86_64

Version: 2.1
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 15-16 (bossa-analysis.Rmd)
    Error: processing vignette 'bossa-analysis.Rmd' failed with diagnostics:
    there is no package called 'BiocStyle'
    Execution halted
Flavor: r-release-osx-x86_64